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Mettu_0647 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0647" - Riboflavin biosynthesis protein RibD domain-containing protein in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0647Riboflavin biosynthesis protein RibD domain-containing protein (280 aa)    
Predicted Functional Partners:
Mettu_0649
Ornithine cyclodeaminase (336 aa)
              0.775
Mettu_0648
Rubredoxin-type Fe(Cys)4 protein (237 aa)
              0.775
Mettu_1410
Thiol-disulfide oxidoreductase DCC (630 aa)
   
          0.761
Mettu_2964
Multicopper oxidase type 3 (577 aa)
   
          0.712
Mettu_1011
Integral membrane sensor signal transduction histidine kinase (483 aa)
   
          0.704
Mettu_2814
Multicopper oxidase type 2 (545 aa)
   
          0.700
Mettu_0705
Copper resistance D domain protein (545 aa)
   
          0.651
Mettu_0737
Polyketide cyclase/dehydrase (141 aa)
   
          0.639
Mettu_3926
TonB-dependent receptor plug (670 aa)
   
          0.631
Mettu_0301
DNA/RNA non-specific endonuclease (297 aa)
   
          0.618
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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