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Mettu_0648 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0648" - Rubredoxin-type Fe(Cys)4 protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0648Rubredoxin-type Fe(Cys)4 protein (237 aa)    
Predicted Functional Partners:
Mettu_0649
Ornithine cyclodeaminase (336 aa)
              0.859
Mettu_0647
Riboflavin biosynthesis protein RibD domain-containing protein (280 aa)
              0.775
Mettu_2108
Post-segregation antitoxin CcdA (82 aa)
   
          0.651
Mettu_4320
Putative uncharacterized protein (108 aa)
   
          0.609
Mettu_1649
TonB-dependent receptor plug (837 aa)
   
          0.568
Mettu_0550
Putative uncharacterized protein (171 aa)
   
          0.552
Mettu_0650
Pterin carbinolamine dehydratase (111 aa)
              0.546
Mettu_4382
Putative uncharacterized protein (171 aa)
   
          0.539
Mettu_0646
Putative uncharacterized protein (112 aa)
              0.503
Mettu_3822
Uncharacterized protein family UPF0150 (138 aa)
   
          0.496
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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