STRINGSTRING
Mettu_0650 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0650" - Pterin carbinolamine dehydratase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0650Pterin carbinolamine dehydratase (111 aa)    
Predicted Functional Partners:
Mettu_0649
Ornithine cyclodeaminase (336 aa)
              0.546
Mettu_0648
Rubredoxin-type Fe(Cys)4 protein (237 aa)
              0.546
proB
Gamma-glutamyl kinase ; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (373 aa)
           
  0.522
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (315 aa)
           
  0.522
pyrD
Dihydroorotate oxidase ; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (337 aa)
         
  0.504
Mettu_0647
Riboflavin biosynthesis protein RibD domain-containing protein (280 aa)
              0.499
Mettu_3791
Ribosome biogenesis GTPase RsgA ; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (295 aa)
              0.493
Mettu_3790
Ste24 endopeptidase (416 aa)
              0.493
orn
Oligoribonuclease ; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (181 aa)
              0.493
Mettu_3491
Putative uncharacterized protein (378 aa)
              0.493
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (8%) [HD]