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STRINGSTRING
Mettu_0657 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0657" - PFAM: Protein of unknown function DUF336 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0657PFAM- Protein of unknown function DUF336; KEGG- mrd-Mrad2831_4389 hypothetical protein (144 aa)    
Predicted Functional Partners:
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily (467 aa)
              0.643
Mettu_0655
annotation not available (58 aa)
              0.643
Mettu_1703
PFAM- TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG- ccs-CCNA_01194 TonB-dependent receptor (799 aa)
     
 
  0.617
Mettu_1728
KEGG- rfr-Rfer_3396 TonB-dependent receptor; TIGRFAM- Bacterial TonB-dependent receptor; PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug (853 aa)
     
      0.609
Mettu_1028
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- mca-MCA2180 TonB-dependent receptor, putative (688 aa)
     
      0.605
Mettu_2371
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- hse-Hsero_3245 TonB-dependent receptor protein (810 aa)
       
      0.530
Mettu_2370
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- nmu-Nmul_A0635 TonB-dependent receptor (794 aa)
       
      0.530
Mettu_2316
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG- gca-Galf_1748 TonB-dependent receptor (808 aa)
       
      0.530
Mettu_2251
PFAM- TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG- rva-Rvan_3612 TonB-dependent receptor plug (915 aa)
       
      0.530
Mettu_1653
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- app-CAP2UW1_0594 TonB-dependent receptor (796 aa)
       
      0.530
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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