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Mettu_0686 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0686" - Polysaccharide deacetylase in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0686Polysaccharide deacetylase (646 aa)    
Predicted Functional Partners:
Mettu_0687
Glycosyl transferase family 2 (442 aa)
 
   
  0.992
Mettu_3299
Glycosyl transferase family 2 (559 aa)
   
 
  0.850
Mettu_0634
Glycosyl transferase family 2 (876 aa)
   
   
  0.843
Mettu_4228
Glycosyl transferase family 2 (394 aa)
   
   
  0.841
Mettu_1857
Glycosyl transferase family 2 (248 aa)
 
 
  0.793
Mettu_1769
Glycosyl transferase family 2 (295 aa)
 
 
  0.792
Mettu_4233
Glycosyl transferase family 2 (321 aa)
   
 
  0.763
Mettu_4232
Glycosyl transferase family 2 (331 aa)
   
 
  0.763
Mettu_3903
Glycosyl transferase family 2 (345 aa)
   
 
  0.763
Mettu_3763
Glycosyl transferase family 2 (243 aa)
   
 
  0.763
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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