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Mettu_0705 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0705" - PFAM: Copper resistance D in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0705PFAM- Copper resistance D; KEGG- mca-MCA0807 copper resistance protein (545 aa)    
Predicted Functional Partners:
Mettu_0706
PFAM- Copper resistance protein CopC, core; KEGG- mca-MCA0808 hypothetical protein (118 aa)
   
   
  0.887
Mettu_0707
KEGG- mca-MCA0809 acetylornithine aminotransferase, putative; PFAM- Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (461 aa)
 
          0.873
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily (620 aa)
              0.850
Mettu_0708
TIGRFAM- Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG- mca-MCA0810 hypothetical protein (856 aa)
 
          0.825
Mettu_1410
KEGG- nhl-Nhal_1176 putative thiol-disulfide oxidoreductase DCC; PFAM- Putative thiol-disulphide oxidoreductase DCC; SMART- HTTM (630 aa)
   
          0.775
Mettu_2428
KEGG- mca-MCA2853 methane monooxygenase, B subunit; TIGRFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit B (414 aa)
   
          0.760
Mettu_1049
PFAM- Methyltransferase type 11; KEGG- mca-MCA1384 UbiE/COQ5 family methlytransferase (246 aa)
   
          0.759
Mettu_2426
KEGG- mca-MCA2855 ammonia monooxygenase/methane monooxygenase, subunit C family protein; TIGRFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit C (250 aa)
   
          0.755
Mettu_0711
PFAM- Squalene/phytoene synthase; KEGG- mca-MCA0813 squalene synthase (399 aa)
 
     
  0.754
Mettu_1878
PFAM- General secretion pathway protein M; KEGG- mca-MCA1122 general secretion pathway protein, putative (195 aa)
   
          0.754
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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