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Mettu_0708 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0708" - TIGRFAM: Hopanoid biosynthesis associated RND transporter like protein HpnN in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Experiments
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[Homology]
Score
Mettu_0708TIGRFAM- Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG- mca-MCA0810 hypothetical protein (856 aa)    
Predicted Functional Partners:
Mettu_0709
KEGG- mca-MCA0811 phosphorylase family protein; TIGRFAM- Hopanoid-associated phosphorylase HpnG; PFAM- Nucleoside phosphorylase (239 aa)
 
          0.929
Mettu_0710
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (651 aa)
 
          0.923
Mettu_0707
KEGG- mca-MCA0809 acetylornithine aminotransferase, putative; PFAM- Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (461 aa)
 
          0.860
Mettu_0711
PFAM- Squalene/phytoene synthase; KEGG- mca-MCA0813 squalene synthase (399 aa)
 
          0.841
Mettu_0705
PFAM- Copper resistance D; KEGG- mca-MCA0807 copper resistance protein (545 aa)
 
          0.825
Mettu_0712
KEGG- nmu-Nmul_A2560 radical SAM family protein; TIGRFAM- Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM- Radical SAM (369 aa)
 
          0.819
Mettu_0576
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (654 aa)
 
          0.779
Mettu_0706
PFAM- Copper resistance protein CopC, core; KEGG- mca-MCA0808 hypothetical protein (118 aa)
              0.773
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily (620 aa)
              0.773
Mettu_0713
KEGG- nmu-Nmul_A2559 toluene tolerance; TIGRFAM- Hopanoid biosynthesis-associated membrane protein HpnM; PFAM- Toluene tolerance (205 aa)
 
      0.705
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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