• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_0709 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0709" - KEGG: mca:MCA0811 phosphorylase family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0709KEGG- mca-MCA0811 phosphorylase family protein; TIGRFAM- Hopanoid-associated phosphorylase HpnG; PFAM- Nucleoside phosphorylase (239 aa)    
Predicted Functional Partners:
Mettu_0710
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (651 aa)
 
   
  0.964
Mettu_0708
TIGRFAM- Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG- mca-MCA0810 hypothetical protein (856 aa)
 
          0.929
Mettu_0711
PFAM- Squalene/phytoene synthase; KEGG- mca-MCA0813 squalene synthase (399 aa)
 
     
  0.921
Mettu_0712
KEGG- nmu-Nmul_A2560 radical SAM family protein; TIGRFAM- Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM- Radical SAM (369 aa)
 
   
  0.864
Mettu_0576
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (654 aa)
 
   
  0.812
Mettu_2989
TIGRFAM- Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG- nmu-Nmul_A1652 hypothetical protein (883 aa)
 
          0.791
Mettu_0707
KEGG- mca-MCA0809 acetylornithine aminotransferase, putative; PFAM- Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (461 aa)
 
          0.731
Mettu_0705
PFAM- Copper resistance D; KEGG- mca-MCA0807 copper resistance protein (545 aa)
 
          0.721
speE
Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family (282 aa)
   
  0.703
Mettu_1438
PFAM- Spermine synthase; KEGG- mca-MCA1034 hypothetical protein (269 aa)
   
  0.700
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (12%) [HD]