STRINGSTRING
Mettu_0712 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0712" - Hopanoid biosynthesis associated radical SAM protein HpnH in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0712Hopanoid biosynthesis associated radical SAM protein HpnH (369 aa)    
Predicted Functional Partners:
Mettu_0710
Squalene-hopene cyclase (651 aa)
 
          0.905
Mettu_0576
Squalene-hopene cyclase (654 aa)
 
          0.882
Mettu_0708
Hopanoid biosynthesis associated RND transporter like protein HpnN (856 aa)
 
          0.857
Mettu_2989
Hopanoid biosynthesis associated RND transporter like protein HpnN (883 aa)
 
          0.828
Mettu_0709
Hopanoid-associated phosphorylase (239 aa)
 
          0.816
Mettu_0713
Hopanoid biosynthesis associated membrane protein HpnM (205 aa)
 
          0.759
cysG
Siroheme synthase ; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme (464 aa)
   
   
  0.728
Mettu_0711
Squalene/phytoene synthase (399 aa)
 
          0.714
Mettu_3247
Putative transcriptional regulator, AsnC family (184 aa)
   
 
  0.678
Mettu_3246
Putative transcriptional regulator, AsnC family (147 aa)
   
 
  0.678
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (5%) [HD]