STRINGSTRING
Mettu_0734 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0734" - Sigma54 specific transcriptional regulator, Fis family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0734Sigma54 specific transcriptional regulator, Fis family (301 aa)    
Predicted Functional Partners:
Mettu_2483
RNA polymerase sigma-54 factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (481 aa)
    
     
  0.871
Mettu_3414
Nitrogenase cofactor biosynthesis protein NifB (496 aa)
         
  0.712
Mettu_3408
PAS/PAC sensor signal transduction histidine kinase (538 aa)
       
  0.463
nifH
Nitrogenase reductase ; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components- the iron protein and the molybdenum-iron protein (293 aa)
         
  0.462
Mettu_1815
Two component, sigma54 specific, transcriptional regulator, Fis family (447 aa)
 
 
 
0.456
Mettu_1183
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family (471 aa)
 
 
 
0.456
Mettu_3660
Two component, sigma54 specific, transcriptional regulator, Fis family (468 aa)
 
 
 
0.451
hemE
Uroporphyrinogen decarboxylase ; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (355 aa)
            
  0.444
Mettu_3766
Putative two component, sigma54 specific, transcriptional regulator (453 aa)
 
 
 
0.438
Mettu_0733
Toxic anion resistance family protein (380 aa)
              0.431
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (8%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >