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Mettu_0750 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0750" - Geranyltranstransferase in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0750Geranyltranstransferase (298 aa)    
Predicted Functional Partners:
Mettu_0711
Squalene/phytoene synthase (399 aa)
 
  0.977
xseB
Exodeoxyribonuclease VII small subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (77 aa)
 
        0.976
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (315 aa)
   
 
  0.966
dxs
1-deoxyxylulose-5-phosphate synthase ; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (620 aa)
   
  0.936
uppS
Undecaprenyl pyrophosphate synthase ; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide (262 aa)
 
  0.934
Mettu_1697
Trans-hexaprenyltranstransferase (336 aa)
   
 
0.922
Mettu_0277
ThiJ/PfpI domain-containing protein (231 aa)
       
    0.900
xseA
Exodeoxyribonuclease VII large subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (452 aa)
 
   
  0.841
Mettu_3292
Monooxygenase, FAD-binding protein (409 aa)
   
  0.840
Mettu_2829
30S ribosomal protein S1 ; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (553 aa)
   
 
    0.831
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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