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Mettu_0812 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0812" - KEGG: tgr:Tgr7_2446 hypothetical protein in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0812KEGG- tgr-Tgr7_2446 hypothetical protein (325 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
       
  0.805
Mettu_3850
DNA-directed DNA polymerase; SMART- Polymerase/histidinol phosphatase, N-terminal; TIGRFAM- DNA polymerase III, alpha subunit; KEGG- mca-MCA1286 DNA polymerase III, alpha subunit; PFAM- Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type (1164 aa)
       
  0.706
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity (540 aa)
   
 
  0.643
Mettu_2688
TIGRFAM- DNA polymerase III, delta subunit; KEGG- cja-CJA_0452 DNA polymerase III subunit delta; PFAM- DNA polymerase III, delta (337 aa)
       
  0.639
nadK
NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP (301 aa)
         
  0.635
dcd
dCTP deaminase; TIGRFAM- Deoxycytidine triphosphate deaminase; HAMAP- Deoxycytidine triphosphate deaminase; KEGG- kko-Kkor_1690 deoxycytidine triphosphate deaminase; Belongs to the dCTP deaminase family (188 aa)
     
 
    0.631
Mettu_1953
Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] (366 aa)
         
  0.629
Mettu_2950
KEGG- hypothetical protein (209 aa)
   
          0.537
Mettu_0811
PFAM- Uncharacterised protein family UPF0150; KEGG- cyh-Cyan8802_4509 protein of unknown function UPF0150 (67 aa)
              0.498
Mettu_0803
KEGG- nwa-Nwat_1399 CSE3 family CRISPR-associated protein; TIGRFAM- CRISPR-associated protein, CT1974; PFAM- CRISPR-associated protein, CT1974 (205 aa)
 
 
      0.491
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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