STRINGSTRING
Mettu_0815 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0815" - LemA family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0815LemA family protein (201 aa)    
Predicted Functional Partners:
Mettu_0816
Putative uncharacterized protein (281 aa)
 
          0.980
Mettu_0817
Putative uncharacterized protein (167 aa)
 
          0.979
Mettu_0354
Peptidase M48 Ste24p (654 aa)
 
     
  0.625
Mettu_0814
Pyrophosphate-energized proton pump (708 aa)
              0.507
Mettu_3060
Heat shock protein HtpX (292 aa)
         
  0.490
Mettu_2833
Heat shock protein HtpX (291 aa)
         
  0.490
Mettu_3801
Transcriptional regulator, MerR family (117 aa)
              0.487
Mettu_3108
Transcriptional regulator, MerR family (342 aa)
              0.487
Mettu_2661
Regulatory protein MerR (300 aa)
              0.487
Mettu_3790
Ste24 endopeptidase (416 aa)
              0.487
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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