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Mettu_0829 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0829" - TIGRFAM: DNA polymerase III, delta prime subunit in Methylobacter tundripaludum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Mettu_0829TIGRFAM- DNA polymerase III, delta prime subunit; KEGG- mca-MCA1995 DNA polymerase III, delta prime subunit (352 aa)    
Predicted Functional Partners:
Mettu_2688
TIGRFAM- DNA polymerase III, delta subunit; KEGG- cja-CJA_0452 DNA polymerase III subunit delta; PFAM- DNA polymerase III, delta (337 aa)
 
  0.992
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity (540 aa)
 
0.991
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (223 aa)
 
   
  0.990
Mettu_1953
Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] (366 aa)
 
  0.987
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
 
  0.985
Mettu_3850
DNA-directed DNA polymerase; SMART- Polymerase/histidinol phosphatase, N-terminal; TIGRFAM- DNA polymerase III, alpha subunit; KEGG- mca-MCA1286 DNA polymerase III, alpha subunit; PFAM- Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type (1164 aa)
 
  0.944
Mettu_2524
PFAM- DNA polymerase III chi subunit, HolC; KEGG- nhl-Nhal_3009 DNA polymerase III chi subunit HolC (160 aa)
     
  0.938
Mettu_0826
TIGRFAM- Aminodeoxychorismate lyase, class IV; KEGG- noc-Noc_1662 aminotransferase, class IV; PFAM- Aminotransferase, class IV; overlaps another CDS with the same product name (283 aa)
   
   
  0.909
Mettu_0830
PFAM- Type IV pilus assembly PilZ; KEGG- tgr-Tgr7_1827 type IV pilus assembly PilZ (116 aa)
         
  0.897
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3’-5’ exonuclease (241 aa)
     
  0.895
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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