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STRINGSTRING
Mettu_0830 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0830" - PFAM: Type IV pilus assembly PilZ in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0830PFAM- Type IV pilus assembly PilZ; KEGG- tgr-Tgr7_1827 type IV pilus assembly PilZ (116 aa)    
Predicted Functional Partners:
Mettu_0829
TIGRFAM- DNA polymerase III, delta prime subunit; KEGG- mca-MCA1995 DNA polymerase III, delta prime subunit (352 aa)
         
  0.897
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (223 aa)
              0.889
mltG
Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation (351 aa)
              0.889
Mettu_0826
TIGRFAM- Aminodeoxychorismate lyase, class IV; KEGG- noc-Noc_1662 aminotransferase, class IV; PFAM- Aminotransferase, class IV; overlaps another CDS with the same product name (283 aa)
              0.889
Mettu_4166
TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG- pin-Ping_2411 diguanylate cyclase/phosphodiesterase; SMART- Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted (603 aa)
     
 
  0.822
Mettu_0502
Diguanylate cyclase/phosphodiesterase with CBS domains; KEGG- har-HEAR1023 hypothetical protein; PFAM- Diguanylate phosphodiesterase, predicted; Cystathionine beta-synthase, core; Diguanylate cyclase, predicted; SMART- Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted (598 aa)
     
 
  0.822
Mettu_1088
PFAM- Pilus assembly protein, PilO; KEGG- mca-MCA0327 type 4 fimbrial biogenesis protein PilO (205 aa)
   
   
  0.803
Mettu_1089
PFAM- Fimbrial assembly; KEGG- alv-Alvin_3055 fimbrial assembly family protein (191 aa)
   
   
  0.793
Mettu_3781
KEGG- nwa-Nwat_3070 peptidoglycan-binding lysin domain-containing protein; PFAM- Peptidoglycan-binding lysin domain; SMART- Peptidoglycan-binding Lysin subgroup (372 aa)
   
        0.780
Mettu_1087
PFAM- Pilus assembly protein PilP; KEGG- mca-MCA0328 type 4 fimbrial biogenesis protein PilP (220 aa)
   
        0.776
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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