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Mettu_0848 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0848" - KEGG: nhl:Nhal_2442 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0848KEGG- nhl-Nhal_2442 hypothetical protein (683 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
     
  0.985
Mettu_3211
Conserved repeat domain protein; TIGRFAM- Protein of unknown function DUF11; PFAM- Protein of unknown function DUF11; KEGG- har-HEAR1945 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (pilus type IV); putative signal peptide; SMART- LamG-like jellyroll fold (1696 aa)
     
  0.924
Mettu_0882
KEGG- nwa-Nwat_2311 hypothetical protein (195 aa)
 
   
  0.857
Mettu_0251
PFAM- Bacterial surface antigen (D15); Surface antigen variable number; KEGG- tgr-Tgr7_0448 outer membrane protein, OMP85 family (576 aa)
 
  0.854
Mettu_3908
KEGG- mba-Mbar_B3754 hypothetical protein; PFAM- PKD; Fibronectin, type III; SMART- LamG-like jellyroll fold; PKD (588 aa)
 
 
  0.800
Mettu_1083
KEGG- pmy-Pmen_0549 sporulation domain-containing protein; PFAM- Sporulation/cell division region, bacteria; SMART- ATPase, AAA+ type, core (628 aa)
 
  0.783
Mettu_2340
KEGG- pin-Ping_2394 filamentous haemagglutinin outer membrane protein; TIGRFAM- Filamentous haemagglutinin, N-terminal, bacterial; PFAM- Filamentous haemagglutinin, N-terminal, bacterial; GLUG (1946 aa)
     
  0.768
Mettu_1098
KEGG- sku-Sulku_0590 hemolysin-type calcium-binding region (1077 aa)
     
  0.642
Mettu_3461
PFAM- Haem peroxidase, animal; KEGG- bja-blr7227 hypothetical protein (553 aa)
   
 
  0.638
Mettu_1485
KEGG- cja-CJA_2880 hypothetical protein (357 aa)
       
  0.583
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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