STRINGSTRING
Mettu_0854 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0854" - Transposase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0854Transposase (356 aa)    
Predicted Functional Partners:
Mettu_0872
Transposase (278 aa)
   
          0.687
Mettu_0200
Transposase (278 aa)
   
          0.686
Mettu_0200
No annotation available (278 aa)
   
          0.686
Mettu_2714
Plasmid pRiA4b ORF-3 family protein (419 aa)
   
          0.683
Mettu_2853
Transketolase domain-containing protein (644 aa)
   
          0.614
Mettu_3179
Putative signal transduction protein with Nacht domain (644 aa)
   
          0.497
Mettu_3113
Putative uncharacterized protein (84 aa)
   
          0.449
Mettu_2995
Putative uncharacterized protein (188 aa)
   
          0.434
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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