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Mettu_0873 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0873" - Hemolysin-type calcium binding domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0873Hemolysin-type calcium binding domain protein; PFAM- Haemolysin-type calcium binding related; Haemolysin-type calcium-binding region; KEGG- gpb-HDN1F_23650 hemolysin-type calcium-binding protein (700 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
 
  0.958
Mettu_0851
KEGG- mmb-Mmol_0477 type I secretion membrane fusion protein, HlyD family; TIGRFAM- Type I secretion membrane fusion protein, HlyD; PFAM- Secretion protein HlyD (445 aa)
 
   
  0.746
Mettu_0878
Peptide-transporting ATPase; PFAM- ABC transporter-like; ABC transporter, transmembrane region; KEGG- slt-Slit_1605 ABC transporter related protein; SMART- ATPase, AAA+ type, core (713 aa)
 
   
  0.704
Mettu_0874
annotation not available (31 aa)
              0.625
Mettu_0872
Transposase; Manually curated; KEGG- mar-MAE_11690 transposase (278 aa)
              0.606
Mettu_0848
KEGG- nhl-Nhal_2442 hypothetical protein (683 aa)
       
  0.583
Mettu_0253
PFAM- Protein of unknown function DUF490; KEGG- noc-Noc_0371 hypothetical protein (1147 aa)
       
  0.583
Mettu_0875
annotation not available (33 aa)
              0.518
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (488 aa)
       
    0.461
Mettu_2340
KEGG- pin-Ping_2394 filamentous haemagglutinin outer membrane protein; TIGRFAM- Filamentous haemagglutinin, N-terminal, bacterial; PFAM- Filamentous haemagglutinin, N-terminal, bacterial; GLUG (1946 aa)
       
  0.434
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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