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Mettu_0882 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0882" - KEGG: nwa:Nwat_2311 hypothetical protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0882KEGG- nwa-Nwat_2311 hypothetical protein (195 aa)    
Predicted Functional Partners:
rlmD
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA (444 aa)
              0.889
Mettu_0848
KEGG- nhl-Nhal_2442 hypothetical protein (683 aa)
 
   
  0.857
Mettu_0884
ErfK/YbiS/YcfS/YnhG family protein; PFAM- YkuD domain; KEGG- mca-MCA1874 hypothetical protein (168 aa)
              0.727
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (267 aa)
              0.557
Mettu_2494
Adenosine kinase; KEGG- mca-MCA0047 carbohydrate kinase; PFAM- Carbohydrate/purine kinase (310 aa)
   
          0.547
Mettu_2682
KEGG- nmu-Nmul_A2260 Slp family outer membrane lipoprotein; TIGRFAM- Outer membrane lipoprotein Slp; PFAM- Outer membrane lipoprotein Slp (187 aa)
   
          0.487
Mettu_1126
PFAM- Auxin efflux carrier; KEGG- tgr-Tgr7_2425 auxin efflux carrier (306 aa)
   
          0.485
Mettu_2116
KEGG- mca-MCA2466 hypothetical protein (114 aa)
   
          0.445
Mettu_0881
Response regulator receiver modulated diguanylate cyclase; TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Two component regulator three Y; Two component regulator propeller; Signal transduction response regulator, receiver region; KEGG- sli-Slin_1754 histidine kinase; SMART- Diguanylate cyclase, predicted; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal trans [...] (1640 aa)
              0.403
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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