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truA protein (Methylobacter tundripaludum) - STRING interaction network
"truA" - tRNA-uridine isomerase I in Methylobacter tundripaludum
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
truAtRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (267 aa)    
Predicted Functional Partners:
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (342 aa)
   
 
  0.934
Mettu_0892
FolC bifunctional protein (423 aa)
 
   
  0.872
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (282 aa)
 
   
  0.843
rlmD
23S rRNA(m5U1939)-methyltransferase ; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA (444 aa)
   
   
  0.840
Mettu_1560
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (314 aa)
 
   
  0.828
trpA
Tryptophan synthase alpha chain ; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate (267 aa)
         
  0.805
leuC
Isopropylmalate isomerase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (472 aa)
         
  0.805
Mettu_3848
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (319 aa)
 
   
  0.799
Mettu_1598
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (151 aa)
 
   
  0.799
miaA
Isopentenyl-diphosphate-tRNA isopentenyltransferase ; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (317 aa)
 
   
  0.769
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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