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ribB protein (Methylobacter tundripaludum) - STRING interaction network
"ribB" - 3,4-dihydroxy-2-butanone 4-phosphate synthase in Methylobacter tundripaludum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ribB3,4-dihydroxy-2-butanone 4-phosphate synthase ; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (367 aa)    
Predicted Functional Partners:
Mettu_0901
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (361 aa)
 
  0.999
ribH
6,7-dimethyl-8-ribityllumazine synthase ; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (158 aa)
 
  0.999
Mettu_0902
Riboflavin synthase, alpha subunit (218 aa)
  0.999
ribA
GTP cyclohydrolase II ; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5’-phosphate (DARP), formate and pyrophosphate (202 aa)
 
0.978
Mettu_0078
Mutator MutT protein (307 aa)
   
 
  0.929
rpoZ
Transcriptase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (81 aa)
       
    0.917
Mettu_0443
Pyruvate, water dikinase ; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate (803 aa)
     
 
  0.906
Mettu_3572
Hydroxyacylglutathione hydrolase., Thiosulfate sulfurtransferase (365 aa)
   
 
  0.902
thiL
Thiamine-monophosphate kinase ; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 (311 aa)
   
   
  0.900
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (143 aa)
     
 
  0.897
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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