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Mettu_0915 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0915" - Histone deacetylase superfamily in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
Mettu_0915Histone deacetylase superfamily (310 aa)    
Predicted Functional Partners:
rapA
ATP-dependent helicase HepA ; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair (938 aa)
     
  0.859
Mettu_2681
SNF2-related protein (1083 aa)
     
  0.859
Mettu_2658
CoA-binding domain protein (893 aa)
 
 
  0.774
Mettu_3886
Fibronectin type III domain protein (3056 aa)
     
    0.725
Mettu_3955
DNA mismatch repair protein MutS domain protein (532 aa)
   
      0.721
mutS
DNA mismatch repair protein MutS ; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (856 aa)
   
      0.721
Mettu_2000
Ankyrin (180 aa)
   
    0.705
Mettu_0421
Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (193 aa)
     
    0.681
Mettu_3355
AAA ATPase central domain protein (575 aa)
   
    0.678
Mettu_2651
AAA ATPase central domain protein (334 aa)
   
    0.678
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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