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STRINGSTRING
Mettu_0924 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0924" - PFAM: Protein of unknown function DUF847 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0924PFAM- Protein of unknown function DUF847; Peptidoglycan binding domain; KEGG- sde-Sde_3784 XRE family transcriptional regulator (180 aa)    
Predicted Functional Partners:
Mettu_1682
PFAM- Ribonuclease T2; KEGG- azc-AZC_3138 ribonuclease T2 precursor; Belongs to the RNase T2 family (210 aa)
    
          0.512
Mettu_0732
PFAM- 5-bromo-4-chloroindolyl phosphate hydrolysis protein; KEGG- rde-RD1_1990 hypothetical protein (282 aa)
    
          0.502
Mettu_1202
KEGG- tgr-Tgr7_0496 hypothetical protein (281 aa)
    
          0.472
Mettu_0733
PFAM- Toxic anion resistance; KEGG- jan-Jann_1852 toxic anion resistance; Belongs to the TelA family (380 aa)
    
          0.441
Mettu_0923
Uncharacterized protein; Manually curated; KEGG- sbp-Sbal223_2649 hypothetical protein (63 aa)
              0.429
Mettu_0953
KEGG- syf-Synpcc7942_0733 phage portal protein, lambda; TIGRFAM- Phage portal protein, lambda; PFAM- Phage portal protein, lambda (466 aa)
 
          0.427
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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