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STRINGSTRING
Mettu_0943 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0943" - KEGG: nhl:Nhal_0978 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0943KEGG- nhl-Nhal_0978 hypothetical protein (803 aa)    
Predicted Functional Partners:
Mettu_0946
KEGG- xal-XALc_0199 hypothetical protein (180 aa)
 
          0.963
Mettu_0948
PFAM- Phage terminase GpA; KEGG- xal-XALc_0206 hypothetical phage terminase large subunit protein (644 aa)
 
          0.955
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
       
  0.850
Mettu_0947
KEGG- gfo-GFO_2454 hypothetical protein (286 aa)
              0.849
Mettu_0949
annotation not available (81 aa)
              0.845
Mettu_0945
annotation not available (85 aa)
              0.845
Mettu_0944
annotation not available (98 aa)
              0.845
Mettu_0942
annotation not available (57 aa)
              0.845
Mettu_0941
annotation not available (122 aa)
              0.845
Mettu_0953
KEGG- syf-Synpcc7942_0733 phage portal protein, lambda; TIGRFAM- Phage portal protein, lambda; PFAM- Phage portal protein, lambda (466 aa)
 
     
  0.819
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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