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STRINGSTRING
Mettu_0996 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0996" - PFAM: Protein of unknown function DUF2191 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0996PFAM- Protein of unknown function DUF2191; KEGG- gpb-HDN1F_02160 hypothetical protein (65 aa)    
Predicted Functional Partners:
Mettu_0995
PFAM- PilT protein, N-terminal; KEGG- gpb-HDN1F_02150 hypothetical protein (135 aa)
 
 
      0.985
Mettu_4331
KEGG- neu-NE2174 hypothetical protein (108 aa)
 
 
      0.856
Mettu_0998
NnrS family protein; PFAM- NnrS; KEGG- tbd-Tbd_1409 hypothetical protein (391 aa)
              0.694
Mettu_0997
KEGG- cts-Ctha_2404 hypothetical protein (142 aa)
              0.694
Mettu_1103
PFAM- PilT protein, N-terminal; KEGG- nhl-Nhal_1868 hypothetical protein (141 aa)
     
      0.624
Mettu_0690
PFAM- PilT protein, N-terminal; KEGG- syn-sll0406 hypothetical protein (168 aa)
     
      0.624
Mettu_0999
annotation not available (237 aa)
              0.559
Mettu_3411
PFAM- Protein of unknown function DUF433; KEGG- ava-Ava_1741 hypothetical protein (77 aa)
   
     
  0.520
Mettu_1000
PFAM- Rubredoxin-type Fe(Cys)4 protein; KEGG- hne-HNE_0571 rubredoxin (56 aa)
              0.504
Mettu_1540
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- gur-Gura_0778 TonB-dependent receptor (682 aa)
   
          0.413
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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