STRINGSTRING
Mettu_0996 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0996" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0996Putative uncharacterized protein (65 aa)    
Predicted Functional Partners:
Mettu_0995
PilT protein domain protein (135 aa)
 
          0.967
Mettu_0998
NnrS family protein (391 aa)
              0.700
Mettu_0997
Putative uncharacterized protein (142 aa)
              0.700
Mettu_0999
Putative uncharacterized protein (237 aa)
              0.562
Mettu_3628
Putative uncharacterized protein (139 aa)
   
          0.561
Mettu_1000
Rubredoxin (56 aa)
              0.501
Mettu_2067
Putative uncharacterized protein (111 aa)
   
          0.490
Mettu_3412
Putative uncharacterized protein (110 aa)
   
          0.478
Mettu_3411
Putative uncharacterized protein (77 aa)
   
          0.450
Mettu_2995
Putative uncharacterized protein (188 aa)
   
          0.434
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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