STRINGSTRING
Mettu_1000 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1000" - Rubredoxin in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1000Rubredoxin (56 aa)    
Predicted Functional Partners:
Mettu_0999
Putative uncharacterized protein (237 aa)
              0.756
Mettu_4132
Rubredoxin (73 aa)
 
     
  0.739
rimK
Probable alpha-L-glutamate ligase (314 aa)
              0.662
Mettu_3417
Flavodoxin/nitric oxide synthase (427 aa)
 
     
  0.650
Mettu_0998
NnrS family protein (391 aa)
              0.603
Mettu_0997
Putative uncharacterized protein (142 aa)
              0.603
Mettu_3480
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
   
   
  0.591
Mettu_3187
Metallo-beta-lactamase family protein (242 aa)
         
  0.536
Mettu_3146
Beta-lactamase domain protein (256 aa)
         
  0.536
Mettu_1707
Beta-lactamase-like protein (246 aa)
         
  0.536
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (12%) [HD]