STRINGSTRING
rimK protein (Methylobacter tundripaludum) - STRING interaction network
"rimK" - Probable alpha-L-glutamate ligase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKProbable alpha-L-glutamate ligase (314 aa)    
Predicted Functional Partners:
Mettu_0392
Putative uncharacterized protein (170 aa)
          0.987
argB
NAG kinase (295 aa)
       
  0.874
argA
N-acetylglutamate synthase (438 aa)
       
  0.785
argC
N-acetyl-glutamate semialdehyde dehydrogenase (343 aa)
         
  0.783
Mettu_1004
2-oxoglutarate dehydrogenase, E1 subunit (942 aa)
     
    0.769
Mettu_1002
Dihydrolipoyl dehydrogenase (475 aa)
   
 
  0.751
argD
Acetylornithine aminotransferase (395 aa)
         
  0.750
argG
Citrulline--aspartate ligase (404 aa)
         
  0.734
Mettu_3088
GCN5-related N-acetyltransferase (366 aa)
       
    0.727
Mettu_0031
Ribosomal-protein-alanine acetyltransferase (180 aa)
       
    0.727
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (16%) [HD]