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Mettu_1006 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1006" - Histone family protein nucleoid-structuring protein H-NS in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1006Histone family protein nucleoid-structuring protein H-NS (104 aa)    
Predicted Functional Partners:
Mettu_3647
Type IV pilus assembly PilZ (254 aa)
   
          0.655
Mettu_1005
Putative uncharacterized protein (273 aa)
              0.619
Mettu_1961
Putative uncharacterized protein (614 aa)
   
          0.491
Mettu_2111
AAA ATPase (387 aa)
   
          0.475
Mettu_1004
2-oxoglutarate dehydrogenase, E1 subunit (942 aa)
              0.471
Mettu_1003
2-oxoglutarate dehydrogenase complex component E2 ; The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) (422 aa)
              0.471
Mettu_1002
Dihydrolipoyl dehydrogenase (475 aa)
              0.471
Mettu_0426
HSR1-like GTP-binding protein (540 aa)
   
          0.459
Mettu_3513
Polysaccharide biosynthesis protein (439 aa)
   
          0.433
Mettu_1009
Putative uncharacterized protein (74 aa)
              0.423
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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