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STRINGSTRING
Mettu_1017 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1017" - PFAM: Mammalian cell entry related in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1017PFAM- Mammalian cell entry related; KEGG- mca-MCA0172 Mce family protein (304 aa)    
Predicted Functional Partners:
Mettu_1015
Uncharacterized protein; KEGG- mca-MCA0174 ABC transporter, permease protein, putative; TIGRFAM- Protein of unknown function DUF140; PFAM- Protein of unknown function DUF140 (379 aa)
 
  0.997
Mettu_1016
Fe(3+)-transporting ATPase; PFAM- ABC transporter-like; KEGG- mca-MCA0173 ABC transporter, ATP-binding protein; SMART- ATPase, AAA+ type, core (266 aa)
 
  0.991
Mettu_1018
KEGG- mca-MCA0171 putative lipoprotein (181 aa)
 
  0.972
Mettu_0180
PFAM- Sulphate transporter/antisigma-factor antagonist STAS; KEGG- nwa-Nwat_0305 anti-sigma-factor antagonist (103 aa)
   
  0.932
Mettu_0182
KEGG- mca-MCA1968 hypothetical protein; TIGRFAM- Protein of unknown function DUF140; PFAM- Protein of unknown function DUF140 (260 aa)
   
  0.929
Mettu_2744
PFAM- Toluene tolerance; KEGG- mca-MCA2792 hypothetical protein (215 aa)
   
  0.878
Mettu_2541
PFAM- Toluene tolerance; KEGG- mca-MCA2792 hypothetical protein (214 aa)
   
  0.878
Mettu_0713
KEGG- nmu-Nmul_A2559 toluene tolerance; TIGRFAM- Hopanoid biosynthesis-associated membrane protein HpnM; PFAM- Toluene tolerance (205 aa)
   
  0.866
Mettu_0183
Sulfate-transporting ATPase; PFAM- ABC transporter-like; KEGG- mca-MCA1969 ABC transporter, ATP-binding protein; SMART- ATPase, AAA+ type, core (275 aa)
   
  0.845
Mettu_1019
annotation not available (80 aa)
              0.845
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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