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STRINGSTRING
Mettu_1035 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1035" - PFAM: Endonuclease/exonuclease/phosphatase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1035PFAM- Endonuclease/exonuclease/phosphatase; KEGG- llo-LLO_2719 hypothetical protein (284 aa)    
Predicted Functional Partners:
Mettu_1034
PFAM- CDP-alcohol phosphatidyltransferase; KEGG- sun-SUN_1448 phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (196 aa)
       
    0.861
Mettu_1033
KEGG- dar-Daro_1151 type II secretion system protein E; PFAM- Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART- ATPase, AAA+ type, core (605 aa)
              0.663
Mettu_1036
PFAM- Protein of unknown function DUF46; KEGG- mca-MCA0197 hypothetical protein (167 aa)
              0.563
Mettu_0411
KEGG- app-CAP2UW1_1888 phospholipase D/transphosphatidylase (530 aa)
   
 
  0.539
Mettu_0417
4-alpha-glucanotransferase; TIGRFAM- Glycoside hydrolase, family 77; KEGG- mmb-Mmol_0831 4-alpha-glucanotransferase; PFAM- Glycoside hydrolase, family 77 (489 aa)
       
  0.473
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
         
  0.447
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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