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STRINGSTRING
Mettu_1043 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1043" - PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1043PFAM- Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG- mca-MCA1643 peptidyl-prolyl cis-trans isomerase family protein (343 aa)    
Predicted Functional Partners:
Mettu_1046
Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation (178 aa)
              0.889
Mettu_1045
YCII-like protein; PFAM- YCII-related; KEGG- ttu-TERTU_2475 protein YciI (100 aa)
              0.889
Mettu_1044
PFAM- BolA-like protein; KEGG- mca-MCA1644 BolA protein; Belongs to the BolA/IbaG family (92 aa)
   
        0.867
Mettu_1047
annotation not available (111 aa)
              0.787
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
 
  0.746
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (793 aa)
   
 
  0.676
Mettu_4107
Peptidyl-prolyl cis-trans isomerase; Manually curated; KEGG- amc-MADE_03986 putative periplasmic peptidyl-prolyl cis-trans isomerase; PFAM- Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (160 aa)
     
 
  0.632
bamB
Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (416 aa)
     
 
  0.613
Mettu_3462
KEGG- hypothetical protein (666 aa)
     
 
  0.600
Mettu_2225
KEGG- msl-Msil_0411 hypothetical protein (475 aa)
     
 
  0.600
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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