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Mettu_1053 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1053" - Transcriptional regulator, LysR family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1053Transcriptional regulator, LysR family (307 aa)    
Predicted Functional Partners:
Mettu_1054
Putative uncharacterized protein (43 aa)
              0.662
Mettu_1058
Major facilitator superfamily MFS_1 (405 aa)
 
          0.463
Mettu_1055
Methane monooxygenase/ammonia monooxygenase, subunit A (250 aa)
              0.454
Mettu_1056
Methane monooxygenase/ammonia monooxygenase, subunit B (413 aa)
              0.436
Mettu_1057
Methane monooxygenase/ammonia monooxygenase, subunit C (257 aa)
              0.409
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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