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Mettu_1054 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1054" - annotation not available in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1054annotation not available (43 aa)    
Predicted Functional Partners:
Mettu_1053
PFAM- LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG- LysR family transcriptional regulator (307 aa)
              0.626
Mettu_1055
KEGG- mca-MCA2854 methane monooxygenase, A subunit; TIGRFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit A (250 aa)
              0.552
Mettu_1056
KEGG- mca-MCA2853 methane monooxygenase, B subunit; TIGRFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit B (413 aa)
              0.532
Mettu_1057
KEGG- mca-MCA2855 ammonia monooxygenase/methane monooxygenase, subunit C family protein; TIGRFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM- Ammonia monooxygenase/particulate methane monooxygenase, subunit C (257 aa)
              0.497
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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