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STRINGSTRING
Mettu_1058 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1058" - PFAM: Major facilitator superfamily MFS-1 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1058PFAM- Major facilitator superfamily MFS-1; KEGG- npu-Npun_F6253 major facilitator transporter (405 aa)    
Predicted Functional Partners:
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
       
  0.840
Mettu_4339
KEGG- avi-Avi_5388 glucose/galactose transporter; TIGRFAM- Bacterial glucose/galactose transporter; PFAM- Major facilitator superfamily MFS-1 (424 aa)
   
   
  0.766
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family (225 aa)
   
 
  0.592
Mettu_3929
Glycerol-3-phosphate dehydrogenase; KEGG- slt-Slit_2459 FAD dependent oxidoreductase; PFAM- FAD dependent oxidoreductase (528 aa)
   
 
  0.522
Mettu_1059
Uncharacterized protein; PFAM- Domain of unknown function DUF1993; KEGG- hypothetical protein (168 aa)
              0.521
Mettu_1053
PFAM- LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG- LysR family transcriptional regulator (307 aa)
 
 
 
  0.520
Mettu_3168
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (291 aa)
   
   
  0.507
Mettu_2094
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (321 aa)
   
   
  0.507
Mettu_0443
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (803 aa)
         
  0.474
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily (421 aa)
         
  0.466
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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