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STRINGSTRING
Mettu_1060 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1060" - PFAM: Metal-dependent phosphohydrolase, HD region, subdomain in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1060PFAM- Metal-dependent phosphohydrolase, HD region, subdomain; KEGG- ctt-CtCNB1_0064 HD phosphohydrolase-like protein (194 aa)    
Predicted Functional Partners:
Mettu_1290
PFAM- Phytanoyl-CoA dioxygenase; KEGG- pmf-P9303_23361 hypothetical protein (284 aa)
 
   
    0.583
Mettu_1059
Uncharacterized protein; PFAM- Domain of unknown function DUF1993; KEGG- hypothetical protein (168 aa)
 
          0.548
Mettu_4299
PFAM- Short-chain dehydrogenase/reductase SDR; KEGG- nhl-Nhal_3057 short-chain dehydrogenase/reductase SDR (244 aa)
   
          0.475
Mettu_3473
Uncharacterized protein; KEGG- lhk-LHK_01548 virulence gene repressor RsaL (98 aa)
   
          0.448
Mettu_3319
PFAM- Phytanoyl-CoA dioxygenase; KEGG- aba-Acid345_4531 phytanoyl-CoA dioxygenase (346 aa)
       
    0.401
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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