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Mettu_1061 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1061" - DEAD/H associated domain protein in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1061DEAD/H associated domain protein (1442 aa)    
Predicted Functional Partners:
Mettu_1062
Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (166 aa)
              0.499
fpg
DNA-(apurinic or apyrimidinic site) lyase MutM ; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (271 aa)
   
        0.496
Mettu_4048
RNA-metabolising metallo-beta-lactamase (466 aa)
              0.493
Mettu_4196
Putative uncharacterized protein (148 aa)
   
          0.454
Mettu_0738
Transcriptional regulator, AraC family (276 aa)
   
          0.434
Mettu_4198
Glyoxalase/bleomycin resistance protein/dioxygenase (156 aa)
 
          0.421
Mettu_2899
Glycine cleavage system transcriptional repressor, putative (186 aa)
   
          0.401
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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