STRINGSTRING
Mettu_1066 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1066" - RimK domain protein ATP-grasp in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1066RimK domain protein ATP-grasp (494 aa)    
Predicted Functional Partners:
Mettu_3088
GCN5-related N-acetyltransferase (366 aa)
 
    0.959
argA
N-acetylglutamate synthase (438 aa)
       
  0.785
argB
NAG kinase (295 aa)
       
  0.753
Mettu_0031
Ribosomal-protein-alanine acetyltransferase (180 aa)
       
    0.727
dapE
N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase ; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (375 aa)
   
 
  0.665
Mettu_1004
2-oxoglutarate dehydrogenase, E1 subunit (942 aa)
       
    0.567
Mettu_3986
3-isopropylmalate dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (368 aa)
       
  0.565
Mettu_3175
Isocitrate dehydrogenase (NAD(+)) (337 aa)
       
  0.565
Mettu_4052
Putative uncharacterized protein (430 aa)
 
        0.557
Mettu_3447
Citrate synthase (434 aa)
       
  0.542
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (6%) [HD]