STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW22282.1PFAM: Fimbrial assembly; KEGG: alv:Alvin_3055 fimbrial assembly family protein. (191 aa)    
Predicted Functional Partners:
EGW22281.1
PFAM: Pilus assembly protein, PilO; KEGG: mca:MCA0327 type 4 fimbrial biogenesis protein PilO.
 
 
 0.999
EGW22283.1
TIGRFAM: Type IV pilus assembly protein PilM; KEGG: tgr:Tgr7_3023 type IV pilus assembly protein PilM.
 
 0.999
EGW22279.1
Type IV pilus secretin PilQ; KEGG: mca:MCA0329 fimbrial assembly protein PilQ; TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal.
 
 
 0.998
EGW22280.1
PFAM: Pilus assembly protein PilP; KEGG: mca:MCA0328 type 4 fimbrial biogenesis protein PilP.
 
 
 0.998
EGW20633.1
KEGG: nwa:Nwat_3070 peptidoglycan-binding lysin domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
  
 
   0.960
EGW22544.1
KEGG: pca:Pcar_0381 MshA biogenesis protein MshI-1.
 
 0.950
EGW23039.1
PFAM: Fimbrial assembly; KEGG: mca:MCA1121 general secretion pathway protein L, putative.
  
 0.940
EGW21336.1
FimV; TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: hch:HCH_02433 TPR repeat-containing protein.
  
  
 0.830
EGW21554.1
TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV.
 
   
 0.814
EGW22035.1
PFAM: Type IV pilus assembly PilZ; KEGG: tgr:Tgr7_1827 type IV pilus assembly PilZ.
  
   
 0.813
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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