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Mettu_1090 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1090" - TIGRFAM: Type IV pilus assembly protein PilM in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1090TIGRFAM- Type IV pilus assembly protein PilM; KEGG- tgr-Tgr7_3023 type IV pilus assembly protein PilM (353 aa)    
Predicted Functional Partners:
Mettu_1086
Type IV pilus secretin PilQ; KEGG- mca-MCA0329 fimbrial assembly protein PilQ; TIGRFAM- Type IV pilus secretin PilQ; PFAM- Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal (785 aa)
 
 
  0.996
Mettu_1088
PFAM- Pilus assembly protein, PilO; KEGG- mca-MCA0327 type 4 fimbrial biogenesis protein PilO (205 aa)
 
 
  0.996
Mettu_1089
PFAM- Fimbrial assembly; KEGG- alv-Alvin_3055 fimbrial assembly family protein (191 aa)
 
  0.994
Mettu_1087
PFAM- Pilus assembly protein PilP; KEGG- mca-MCA0328 type 4 fimbrial biogenesis protein PilP (220 aa)
 
 
  0.993
Mettu_3781
KEGG- nwa-Nwat_3070 peptidoglycan-binding lysin domain-containing protein; PFAM- Peptidoglycan-binding lysin domain; SMART- Peptidoglycan-binding Lysin subgroup (372 aa)
   
      0.917
Mettu_1091
annotation not available (30 aa)
              0.845
Mettu_3134
Uncharacterized protein; KEGG- pmy-Pmen_2406 NolW domain-containing protein; Belongs to the GSP D family (262 aa)
 
 
  0.818
Mettu_2521
PFAM- Type II secretion system F domain; KEGG- mca-MCA2095 type IV pilin biogenesis protein PilC (406 aa)
 
 
  0.815
Mettu_1360
Uncharacterized protein; KEGG- gca-Galf_0236 fimbrial assembly family protein (207 aa)
 
  0.799
Mettu_1877
PFAM- Fimbrial assembly; KEGG- mca-MCA1121 general secretion pathway protein L, putative (390 aa)
   
  0.766
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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