• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1094 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1094" - PFAM: Peptidase M50 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1094PFAM- Peptidase M50; KEGG- pvi-Cvib_0429 peptidase M50 (704 aa)    
Predicted Functional Partners:
Mettu_1095
KEGG- rce-RC1_3819 hypothetical protein (457 aa)
          0.972
Mettu_1096
Efflux transporter, RND family, MFP subunit; KEGG- azo-azo2555 HlyD family secretion protein; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (280 aa)
 
          0.966
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
 
 
  0.964
Mettu_1097
PFAM- Outer membrane efflux protein; KEGG- cvi-CV_0465 hypothetical protein (518 aa)
 
    0.941
Mettu_1577
PFAM- Outer membrane efflux protein; KEGG- rce-RC1_3821 outer membrane efflux protein (512 aa)
 
    0.883
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
   
  0.828
Mettu_1579
KEGG- rce-RC1_3819 hypothetical protein (444 aa)
          0.824
Mettu_1578
KEGG- azo-azo2555 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (240 aa)
 
          0.790
Mettu_1102
Manually curated; KEGG- sku-Sulku_0590 hemolysin-type calcium-binding region (1392 aa)
 
        0.747
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
     
      0.665
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (12%) [HD]