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Mettu_1100 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1100" - Uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1100Uncharacterized protein; Manually curated (345 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
 
  0.932
Mettu_1099
Manually curated; KEGG- sku-Sulku_0590 hemolysin-type calcium-binding region (1473 aa)
 
       
0.850
Mettu_2952
KEGG- mca-MCA0716 hypothetical protein (634 aa)
   
          0.661
Mettu_1102
Manually curated; KEGG- sku-Sulku_0590 hemolysin-type calcium-binding region (1392 aa)
 
       
0.585
Mettu_0848
KEGG- nhl-Nhal_2442 hypothetical protein (683 aa)
       
  0.583
Mettu_0253
PFAM- Protein of unknown function DUF490; KEGG- noc-Noc_0371 hypothetical protein (1147 aa)
       
  0.583
Mettu_0624
PFAM- Protein of unknown function DUF1207; KEGG- net-Neut_1663 hypothetical protein (362 aa)
   
 
    0.529
Mettu_1098
KEGG- sku-Sulku_0590 hemolysin-type calcium-binding region (1077 aa)
 
   
0.484
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (488 aa)
       
    0.461
Mettu_0505
PFAM- Cytochrome c, class I; KEGG- rhi-NGR_a03200 hypothetical 47.1 kDa protein (505 aa)
   
          0.451
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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