• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1104 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1104" - KEGG: nhl:Nhal_1869 transcriptional regulator, AbrB family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1104KEGG- nhl-Nhal_1869 transcriptional regulator, AbrB family (81 aa)    
Predicted Functional Partners:
Mettu_1103
PFAM- PilT protein, N-terminal; KEGG- nhl-Nhal_1868 hypothetical protein (141 aa)
 
     
  0.967
Mettu_1410
KEGG- nhl-Nhal_1176 putative thiol-disulfide oxidoreductase DCC; PFAM- Putative thiol-disulphide oxidoreductase DCC; SMART- HTTM (630 aa)
   
          0.621
Mettu_2075
Response regulator receiver modulated diguanylate cyclase; TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; Metal-dependent hydrolase HDOD; Signal transduction response regulator, receiver region; KEGG- mca-MCA1203 response regulator; SMART- Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region (617 aa)
   
          0.481
Mettu_0995
PFAM- PilT protein, N-terminal; KEGG- gpb-HDN1F_02150 hypothetical protein (135 aa)
 
     
  0.468
Mettu_3422
KEGG- nhl-Nhal_0107 hypothetical protein (129 aa)
   
          0.463
Mettu_1878
PFAM- General secretion pathway protein M; KEGG- mca-MCA1122 general secretion pathway protein, putative (195 aa)
   
          0.460
Mettu_0490
HicA protein; Manually curated; KEGG- maq-Maqu_2667 HicA protein (82 aa)
   
          0.458
Mettu_1541
KEGG- bwe-BcerKBAB4_1749 hypothetical protein (468 aa)
   
          0.450
Mettu_1011
Integral membrane sensor signal transduction histidine kinase; KEGG- nhl-Nhal_3134 ATP-binding region ATPase domain protein; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region (483 aa)
   
          0.432
Mettu_4331
KEGG- neu-NE2174 hypothetical protein (108 aa)
 
     
  0.427
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (11%) [HD]