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Mettu_1108 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1108" - Aspartyl/Asparaginyl beta-hydroxylase in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1108Aspartyl/Asparaginyl beta-hydroxylase (395 aa)    
Predicted Functional Partners:
Mettu_1110
Putative uncharacterized protein (334 aa)
          0.983
Mettu_1107
GCN5-related N-acetyltransferase (169 aa)
 
          0.839
Mettu_1105
Tail Collar domain protein (223 aa)
 
          0.785
Mettu_1111
Putative uncharacterized protein (350 aa)
 
          0.767
Mettu_3319
Phytanoyl-CoA dioxygenase (346 aa)
 
          0.761
Mettu_1109
Putative uncharacterized protein (68 aa)
              0.759
Mettu_4107
Peptidyl-prolyl cis-trans isomerase (160 aa)
     
 
    0.492
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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