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Mettu_1129 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1129" - KEGG: mca:MCA1095 hypothetical protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1129KEGG- mca-MCA1095 hypothetical protein (242 aa)    
Predicted Functional Partners:
Mettu_1130
Sigma54 specific transcriptional regulator, Fis family; KEGG- mca-MCA1096 sigma-54-dependent transcriptional regulator; PFAM- RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART- ATPase, AAA+ type, core (319 aa)
            0.858
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (241 aa)
              0.638
Mettu_0173
PFAM- Cytochrome c1; KEGG- noc-Noc_0297 cytochrome c1 (240 aa)
   
          0.523
Mettu_2585
TIGRFAM- Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM- HemN, C-terminal; Radical SAM; KEGG- tcx-Tcr_0501 coproporphyrinogen III oxidase; SMART- Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family (460 aa)
 
          0.518
Mettu_0175
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (199 aa)
   
          0.509
Mettu_1127
Rhodanese-like protein; KEGG- mei-Msip34_0552 rhodanese domain protein; PFAM- Rhodanese-like; SMART- Rhodanese-like (127 aa)
              0.469
Mettu_1126
PFAM- Auxin efflux carrier; KEGG- tgr-Tgr7_2425 auxin efflux carrier (306 aa)
 
          0.461
Mettu_2454
PFAM- RDD; KEGG- nwa-Nwat_1709 RDD domain-containing protein (156 aa)
   
          0.450
Mettu_0174
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (468 aa)
   
          0.446
Mettu_3002
PFAM- Protein of unknown function DUF2062; KEGG- slo-Shew_1636 hypothetical protein (190 aa)
   
          0.422
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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