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Mettu_1161 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1161" - Diguanylate phosphodiesterase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
Mettu_1161Diguanylate phosphodiesterase; KEGG- hch-HCH_04128 signal transduction protein; PFAM- Diguanylate phosphodiesterase, predicted; EAL C-terminal; SMART- Diguanylate phosphodiesterase, predicted (424 aa)    
Predicted Functional Partners:
Mettu_0021
Diguanylate cyclase with PAS/PAC sensor; SMART- Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3; TIGRFAM- Diguanylate cyclase, predicted; PAS; KEGG- sdn-Sden_0076 GGDEF domain-containing protein; PFAM- Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3; PAS fold-3 (669 aa)
 
  0.823
Mettu_1564
TIGRFAM- Diguanylate cyclase, predicted; PAS; PFAM- Diguanylate cyclase, predicted; PAS fold; Signal transduction response regulator, receiver region; KEGG- app-CAP2UW1_2559 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; SMART- Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; PAC motif (426 aa)
  0.813
Mettu_2057
TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; MASE1; KEGG- kko-Kkor_1389 diguanylate cyclase; SMART- Diguanylate cyclase, predicted (463 aa)
  0.811
Mettu_3688
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM- Diguanylate cyclase, predicted; PAS; PFAM- Diguanylate cyclase, predicted; PAS fold; Diguanylate phosphodiesterase, predicted; KEGG- app-CAP2UW1_0299 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART- Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS (719 aa)
 
 
  0.799
Mettu_2571
TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; KEGG- pmy-Pmen_1842 diguanylate cyclase; SMART- Diguanylate cyclase, predicted (295 aa)
  0.790
Mettu_0469
TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; KEGG- mmb-Mmol_0022 diguanylate cyclase; SMART- Diguanylate cyclase, predicted (394 aa)
  0.784
Mettu_0726
Diguanylate cyclase with PAS/PAC sensor; TIGRFAM- Diguanylate cyclase, predicted; PAS; PFAM- Diguanylate cyclase, predicted; PAS fold; PAS fold-3; KEGG- sbn-Sbal195_0693 diguanylate cyclase with PAS/PAC sensor; SMART- Diguanylate cyclase, predicted; PAS; PAC motif (658 aa)
  0.784
Mettu_2181
TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; KEGG- hch-HCH_00302 response regulator; SMART- Diguanylate cyclase, predicted (512 aa)
  0.779
Mettu_0741
TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; KEGG- asa-ASA_1016 GGDEF domain-containing protein; SMART- Diguanylate cyclase, predicted (257 aa)
  0.775
Mettu_4311
Diguanylate cyclase with PAS/PAC sensor; TIGRFAM- Diguanylate cyclase, predicted; PAS; PFAM- Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG- slt-Slit_2565 diguanylate cyclase with PAS/PAC sensor; SMART- Diguanylate cyclase, predicted; PAS; PAC motif (744 aa)
 
  0.767
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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