• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1166 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1166" - ABC-type transporter, integral membrane subunit in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1166ABC-type transporter, integral membrane subunit; PFAM- Binding-protein-dependent transport systems inner membrane component; KEGG- ttu-TERTU_1088 nitrate transporter, permease protein (338 aa)    
Predicted Functional Partners:
Mettu_1165
KEGG- amc-MADE_03654 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component (466 aa)
 
 
  0.998
Mettu_1167
SMART- ATPase, AAA+ type, core; TIGRFAM- Nitrate transport ATP-binding subunit C/D; KEGG- sde-Sde_2266 regulatory proteins, AsnC/Lrp; PFAM- ABC transporter-like (621 aa)
 
  0.993
Mettu_1179
Nitrate reductase; KEGG- hch-HCH_05823 anaerobic dehydrogenase; PFAM- Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (897 aa)
 
   
  0.934
Mettu_1151
TIGRFAM- Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG- ttu-TERTU_2948 nitrite reductase [NAD(P)H], large subunit; PFAM- Nitrite/sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family (845 aa)
   
  0.713
Mettu_1180
KEGG- hch-HCH_05820 NAD(P)H-nitrite reductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase (406 aa)
   
  0.704
Mettu_1152
Response regulator receiver and ANTAR domain protein; PFAM- ANTAR; KEGG- mca-MCA0588 response regulator NasT (191 aa)
 
     
  0.671
Mettu_1168
KEGG- rmr-Rmar_1225 hypothetical protein (426 aa)
 
          0.669
Mettu_1234
Taurine-transporting ATPase; PFAM- ABC transporter-like; KEGG- azl-AZL_a05770 ABC transporter ATP-binding protein; SMART- ATPase, AAA+ type, core (242 aa)
 
  0.649
Mettu_1150
TIGRFAM- Nitrite reductase [NAD(P)H] large subunit, NirD; KEGG- mfa-Mfla_0318 nitrite reductase (NAD(P)H) large subunit, NirD (120 aa)
 
          0.497
Mettu_0480
ArsC family protein; KEGG- bcm-Bcenmc03_3864 NADPH-dependent FMN reductase; TIGRFAM- Conserved hypothetical protein, ArsC related; PFAM- Arsenate reductase-like; NADPH-dependent FMN reductase; Belongs to the ArsC family (295 aa)
   
 
    0.481
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (7%) [HD]