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Mettu_1250 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1250" - DEAD/DEAH box helicase domain protein in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1250DEAD/DEAH box helicase domain protein (419 aa)    
Predicted Functional Partners:
Mettu_2674
ATP-dependent DNA helicase RecQ (712 aa)
 
  0.944
Mettu_0730
Serine/threonine protein kinase (448 aa)
      
  0.940
eno
2-phosphoglycerate dehydratase ; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (426 aa)
   
 
  0.924
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (692 aa)
   
 
  0.900
Mettu_0043
Oxaloacetate decarboxylase ; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (161 aa)
        
 
  0.897
Mettu_3285
RNP-1 like RNA-binding protein (88 aa)
   
  0.891
Mettu_1419
RNP-1 like RNA-binding protein (86 aa)
   
  0.891
rpmD
50S ribosomal protein L30 (61 aa)
      
    0.855
Mettu_4189
ATP-dependent helicase HrpA (1315 aa)
      
  0.850
rpsO
30S ribosomal protein S15 ; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (89 aa)
   
  0.842
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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