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STRINGSTRING
Mettu_1269 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1269" - PFAM: Protein of unknown function DUF115 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1269PFAM- Protein of unknown function DUF115; KEGG- pca-Pcar_1143 hypothetical protein (838 aa)    
Predicted Functional Partners:
Mettu_1961
KEGG- pst-PSPTO_0030 hypothetical protein (614 aa)
   
          0.675
Mettu_1984
KEGG- bgf-BC1003_0019 hypothetical protein (602 aa)
   
          0.658
Mettu_3462
KEGG- hypothetical protein (666 aa)
   
          0.642
Mettu_2815
KEGG- dol-Dole_0882 hypothetical protein (179 aa)
   
          0.628
Mettu_2111
SMART- ATPase, AAA+ type, core; KEGG- bac-BamMC406_0007 AAA ATPase (387 aa)
   
          0.626
Mettu_3805
PFAM- Zonular occludens toxin; KEGG- rpi-Rpic_4349 zonular occludens toxin (372 aa)
   
          0.555
Mettu_3589
KEGG- mca-MCA1811 hypothetical protein (426 aa)
   
          0.554
Mettu_1980
TniB family protein; PFAM- Bacterial TniB; KEGG- bgf-BC1003_0018 TniB family protein (324 aa)
   
          0.539
Mettu_4018
PFAM- Glutaredoxin; KEGG- mca-MCA2787 hypothetical protein (400 aa)
   
          0.533
Mettu_3945
KEGG- sli-Slin_1472 ATPase-like protein (350 aa)
   
          0.529
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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