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STRINGSTRING
Mettu_1285 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1285" - PFAM: Radical SAM in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1285PFAM- Radical SAM; KEGG- mag-amb0046 Fe-S oxidoreductase (371 aa)    
Predicted Functional Partners:
Mettu_1284
PFAM- Carbamoyltransferase; KEGG- pag-PLES_32531 putative carbamoyl transferase (567 aa)
 
          0.868
Mettu_1283
annotation not available (362 aa)
              0.845
Mettu_1282
KEGG- sbm-Shew185_3201 CgeB family protein (372 aa)
              0.845
Mettu_0913
Adenylate/guanylate cyclase with Chase sensor; PFAM- CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG- mgm-Mmc1_1858 adenylate/guanylate cyclase; SMART- Adenylyl cyclase class-3/4/guanylyl cyclase (744 aa)
   
   
    0.698
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (355 aa)
       
  0.647
Mettu_1279
PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; KEGG- ddf-DEFDS_0368 aminotransferase DegT/DnrJ/EryC1/StrS family; Belongs to the DegT/DnrJ/EryC1 family (382 aa)
     
    0.635
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
         
  0.601
Mettu_1289
PFAM- Methyltransferase type 11; KEGG- azc-AZC_3475 hypothetical protein (390 aa)
 
 
      0.525
Mettu_2756
PFAM- O-methyltransferase, family 2; KEGG- rme-Rmet_5070 O-methyltransferase family 2 (372 aa)
 
 
      0.522
Mettu_1281
KEGG- cbl-CLK_2102 N-acylneuraminate cytidylyltransferase (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc synthetase); PFAM- Acylneuraminate cytidylyltransferase (234 aa)
              0.514
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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