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STRINGSTRING
Mettu_1287 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1287" - PFAM: DegT/DnrJ/EryC1/StrS aminotransferase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1287PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; KEGG- tsi-TSIB_2051 pyridoxal phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family (375 aa)    
Predicted Functional Partners:
Mettu_1286
PFAM- NAD-dependent epimerase/dehydratase; KEGG- wri-WRi_010400 NAD-dependent epimerase/dehydratase family protein (305 aa)
   
 
  0.861
Mettu_1288
annotation not available (63 aa)
              0.845
Mettu_1781
WxcM-like domain-containing protein; PFAM- WxcM-like, C-terminal; Bacterial transferase hexapeptide repeat; KEGG- ppf-Pput_3930 WxcM domain-containing protein (315 aa)
   
  0.814
Mettu_1289
PFAM- Methyltransferase type 11; KEGG- azc-AZC_3475 hypothetical protein (390 aa)
     
    0.776
Mettu_1940
Methane monooxygenase; KEGG- tbi-Tbis_0140 oxidoreductase FAD/NAD(P)-binding domain-containing protein; PFAM- Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin (345 aa)
       
  0.681
Mettu_3888
Oxidoreductase domain protein; PFAM- Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG- lch-Lcho_1397 oxidoreductase domain-containing protein (347 aa)
 
  0.656
Mettu_3887
KEGG- cyc-PCC7424_5772 transferase hexapeptide repeat containing protein (168 aa)
   
  0.653
Mettu_1405
Methionine synthase; TIGRFAM- 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG- mca-MCA1545 B12-dependent methionine synthase; PFAM- Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region (1226 aa)
       
    0.643
Mettu_2131
Ferredoxin--NAD(+) reductase; KEGG- mca-MCA2508 oxygenase, putative; PFAM- Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin (325 aa)
       
  0.620
Mettu_1766
PFAM- Polysaccharide biosynthesis protein CapD-like; KEGG- rma-Rmag_0886 polysaccharide biosynthesis protein CapD (669 aa)
 
  0.617
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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